Table 1 The association of lncRNA gene SNPs and risk of HCC
GeneChr. pos.SNPaLoc.GenotypeControls (%)Cases (%)PbOR (95% CI)PHWE
Recognition-related
H1911p15.5rs2735971IntronGG313 (67.31)327 (70.32)1 (Ref.)0.697
AG139 (29.89)126 (27.10)0.3360.87 (0.65–1.16)
AA13 (2.80)12 (2.58)0.8240.91 (0.41–2.04)
rs2839698IntronCC245 (53.03)215 (46.14)1 (Ref.)0.297
CT185 (40.04)211 (45.28)0.0581.30 (0.99–1.70)
TT32 (6.93)40 (8.58)0.1571.44 (0.87–2.37)
TT + CT vs CC0.0371.32 (1.02–1.70)
T vs C0.0441.23 (1.01–1.50)
rs3024270IntronGG170 (36.48)151 (32.06)1 (Ref.)0.247
CG215 (46.14)225 (47.78)0.2541.18 (0.89–1.58)
CC81 (17.38)95 (20.16)0.1411.32 (0.91–1.91)
  • Abbreviations: Chr. Pos., chromosomal position; CI, confidence interval; Loc., localization; OR, odds ratio; PHWE, P-value for HWE.

  • aThe sort order was according to the SNP location in its genes from 5′ to 3′ ends.

  • bP-value was calculated by adjusting age and gender. The bold text in this table means the P<0.05 and is significant.